Faculty of Biology

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Dr. Farnoush Farahpour

Biologie / ZMB / Bioinformatics & Computational Biophysics

Address
Universitätsstr 2
45117 Essen
Room
S03 S03 A49
Phone
+49 (0)201 183 4509
Fax
+49 (0)201 183 3437
E-Mail
farnoush.farahpour@uni-due.de
Website
https://www.uni-due.de/zmb/members/farnoush-farahpour.php

Functions

  • Wissenschaftliche/r Mitarbeiter/in, Bioinformatik and Computational Biophysics

The following publications are listed in the online university bibliography of the University of Duisburg-Essen. Further information may also be found on the person's personal web pages.

    Journal articles

  • Kehrmann, Jan; Dostmohammadi, Alireza; Stumpf, Anna-Lena; Best, Lara; Consten, Leah; Sievert, Hannah; Maischack, Felix; Sammet, Stefanie; Albayrak-Rena, Sarah; Doerr, Ann-Kathrin; Bohlen, Katharina; von Velsen, Otgonzul; Kraiselburd, Ivana; Karsten, Christina B.; Farahpour, Farnoush; Meyer, Folker; Esser, Stefan; Buer, Jan
    Gut microbiota differences linked to weight gain and ART in people living with HIV are enterotype specific and minor compared to the large differences linked to sexual behavior
    In: Frontiers in Cellular and Infection Microbiology, Vol. 15, 2025, 1568352
    DOI, Online Full Text (Open Access)
  • Srinivas, Nalini; Peiffer, Lukas; Horny, Kai; Lei, Kuan Cheok; Buus, Terkild B.; Kubat, Linda; Luo, Meng; Yin, Menghong; Spassova, Ivelina; Sucker, Antje; Farahpour, Farnoush; Kehrmann, Jan; Ugurel, Selma; Livingstone, Elisabeth; Gambichler, Thilo; Ødum, Niels; Becker, Jürgen C.
    Single-cell RNA and T-cell receptor sequencing unveil mycosis fungoides heterogeneity and a possible gene signature
    In: Frontiers in Oncology, Vol. 14, 2024, 1408614
    DOI (Open Access)
  • Kitanovski, Simo; Cao, Yingying; Ttoouli, Dimitris; Farahpour, Farnoush; Wang, Jun; Hoffmann, Daniel
    scBubbletree: computational approach for visualization of single cell RNA-seq data
    In: BMC Bioinformatics, Vol. 25, 2024, Nr. 1, 302
    DOI, Online Full Text (Open Access)
  • Reinold, Johanna; Farahpour, Farnoush; Schoerding, Ann-Kathrin; Fehring, Christian; Dolff, Sebastian; Konik, Margarethe; Korth, Johannes; van Baal, Lukas; Buer, Jan; Witzke, Oliver; Westendorf, Astrid M.; Kehrmann, Jan
    The Fungal Gut Microbiome Exhibits Reduced Diversity and Increased Relative Abundance of Ascomycota in Severe COVID-19 Illness and Distinct Interconnected Communities in SARS-CoV-2 Positive Patients
    In: Frontiers in Cellular and Infection Microbiology, Vol. 12, 2022, 848650
    DOI, Online Full Text (Open Access)
  • Reinold, Johanna; Farahpour, Farnoush; Fehring, Christian; Dolff, Sebastian; Konik, Margarethe; Korth, Johannes; van Baal, Lukas; Hoffmann, Daniel; Buer, Jan; Witzke, Oliver; Westendorf, Astrid; Kehrmann, Jan
    A Pro-Inflammatory Gut Microbiome Characterizes SARS-CoV-2 Infected Patients and a Reduction in the Connectivity of an Anti-Inflammatory Bacterial Network Associates With Severe COVID-19
    In: Frontiers in Cellular and Infection Microbiology, Vol. 11, 2021, 747816
    DOI, Online Full Text (Open Access)
  • Pfeiffer, Lukas; Farahpour, Farnoush; Sriram, Ashwin; Spassova, Ivelina; Hoffmann, Daniel; Kubat, Linda; Stoitzner, Patrizia; Gambichler, Thilo; Sucker, Antje; Ugurel, Selma; Schadendorf, Dirk; Becker, Jürgen C.
    BRAF and MEK inhibition in melanoma patients enables reprogramming of tumor infiltrating lymphocytes
    In: Cancer Immunology, Immunotherapy, Vol. 70, 2021, Nr. 6, pp. 1635 – 1647
    DOI (Open Access)
  • Spassova, Ivelina; Ugurel, Selma; Terheyden, Patrick; Sucker, Antje; Hassel, Jessica C.; Ritter, Cathrin; Kubat, Linda; Habermann, Daniel; Farahpour, Farnoush; Saeedghalati, Mohammadkarim; Peiffer, Lukas; Kumar, Rajiv; Schrama, David; Hoffmann, Daniel; Schadendorf, Dirk; Becker, Jürgen C.
    Predominance of Central Memory T Cells with High T-Cell Receptor Repertoire Diversity is Associated with Response to PD-1/PD-L1 Inhibition in Merkel Cell Carcinoma
    In: Clinical Cancer Research, Vol. 26, 2020, Nr. 9, pp. 2257 – 2267
    DOI (Open Access)
  • Kehrmann, Jan; Menzel, Jannis; Saeedghalati, Mohammadkarim; Obeid, Rima; Schulze, Christina; Holzendorf, Volker; Farahpour, Farnoush; Reinsch, Nico; Klein-Hitpaß, Ludger; Streeck, Hendrik; Hoffmann, Daniel; Buer, Jan; Esser, Stefan
    Gut Microbiota in Human Immunodeficiency Virus-Infected Individuals Linked to Coronary Heart Disease
    In: The Journal of Infectious Diseases (JID), Vol. 219, 2019, Nr. 3, pp. 497 – 508
    DOI (Open Access)
  • Farahpour, Farnoush; Saeedghalati, Mohammadkarim; Brauer, Verena S.; Hoffmann, Daniel
    Trade-off shapes diversity in eco-evolutionary dynamics
    In: eLife, Vol. 7, 2018, pp. e36273
    DOI (Open Access)
  • Saeedghalati, Mohammadkarim; Farahpour, Farnoush; Budeus, Bettina; Lange, Anja; Westendorf, Astrid; Seifert, Marc; Küppers, Ralf; Hoffmann, Daniel
    Quantitative Comparison of Abundance Structures of Generalized Communities : from B-Cell Receptor Repertoires to Microbiomes
    In: PLoS Computational Biology, Vol. 13, 2017, Nr. 1, e1005362
    DOI, Online Full Text (Open Access)