ZMB Member Hemmo Meyer
ZMB Member
Hemmo Meyer
Next ZMB-Member
Prof. Dr. Hemmo Meyer
Group
Molecular Biology ICenter of Medical Biotechnology (ZMB)
Faculty of Biology
University of Duisburg-Essen
Universitätsstr. 2
45141 Essen
- +49 201 183 4217
- Website
- Speaker CRC 1430
- Press Releases
- Selected Publications
- ORCID ID
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- ZMB Research Program
Molecular and Chemical Cell Biology
Research Overview
Cellular homeostasis, proliferation and stress responses
Cells need to cope with a multitude of stress conditions that relentlessly inflict damage to its most vital components. This includes insults to the DNA that threatens genome stability, damage of proteins that can then form toxic aggregates, or injury of whole organelles such as mitochondria and lysosomes that releases harmful components. Cells have developed sophisticated molecular responses to these stresses that maintain protein homeostasis and organelle function, and ensure genomic stability. We are interested in deciphering these responses and uncover how they counteract stress-induced cell death and aging-related degeneration, or maintain cell proliferation.
The ubiquitin-proteasome system (UPS) is critically involved in cellular stress responses. Ubiquitination triggers degradation of damaged proteins by the proteasome, or removal of protein aggregates or hole organelles in the lysosome through autophagy. In addition, it regulates signalling pathways such as the DNA damage response and coordinates them with cell cycle progression.
A focus of our research has been the AAA+-type ATPase VCP/p97, which has emerged as a pivotal element of the UPS. It governs a variety of processes such as ER-associated degradation, ribosomal quality control, DNA damage responses as well as autophagy. Mutations in VCP/p97 in humans cause degenerative diseases including amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD), while pharmacological inhibition of VCP/p97 is considered as a strategy in cancer therapy. We have been working to reveal the molecular function of VCP/p97 and to understand how it cooperates with a host of accessory factors to trigger diverse stress responses in different compartments.
Keywords:
Cellular stress responses, proteostasis, ubiquitin-proteasome system, autophagy, lysosomal membrane permeabilization, lysophagy, mitophagy, DNA damage response, double strand break repair, cell cycle regulation.
Distribution of published plasmids through addgene.org.
Press Releases


Decomposition of Damaged Lysosomes New Signaling Pathway Decoded
[08.04.2024] Lysosomen sind die Recyclinghöfe in unseren Zellen: Die kugelförmigen Organellen bauen in ihrem Innern sowohl körpereigene als auch Fremdstoffe ab – zur anschließenden Weiterverwertung. Da ihr Inneres einen sauren pH-Wert aufweist, sind Schäden in der Membran, die die Lysosomen umschließt, gefährlich für Zellen. Wissenschaftler:innen der UDE haben einen neuen Signalweg identifiziert, der in diesem Fall zum Abbau des Lysosoms führt. Ihre Erkenntnisse, veröffentlicht in Molecular Cell, könnten dazu beitragen, neue Ansätze für die Behandlung neurodegenerativer Krankheiten zu entwickeln.


Catabolic Processes in Cells Controlling the Danger Within
[06.07.2022] Trillions of cells in our body work non-stop to keep us alive. This generates waste that is decomposed in specialized cellular organs. But what happens if the cellular trash cans don't work? Researchers assume that this is the cause of numerous diseases. Biologists from UDE, together with a team from Munich, have now been able to show how cells protect themselves from their defective trash cans – because their contents are pretty serious.
Selected Publications
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2024 VCP International Conference : Exploring multi-disciplinary approaches from basic science of valosin containing protein, an AAA+ ATPase protein, to the therapeutic advancement for VCP-associated multisystem proteinopathyIn: Neurobiology of Disease Vol. 207 (2025) 106861Online Full Text: dx.doi.org/ (Open Access)
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Light-Activatable Ubiquitin for Studying Linkage-Specific Ubiquitin Chain Formation KineticsIn: Advanced Science Vol. 12 (2025) Nr. 6, 2406570Online Full Text: dx.doi.org/ (Open Access)
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A modular DNA origami nanocompartment for engineering a cell-free, protein unfolding and degradation pathwayIn: Nature Nanotechnology Vol. 19 (2024) Nr. 10, pp. 1521 - 1531Online Full Text: dx.doi.org/ (Open Access)
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Alternating binding and p97-mediated dissociation of SDS22 and I3 recycles active PP1 between holophosphatasesIn: Proceedings of the National Academy of Sciences of the United States of America (PNAS) Vol. 121 (2024) Nr. 36, e2408787121Online Full Text: dx.doi.org/ (Open Access)
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Lysosomal damage sensing and lysophagy initiation by SPG20-ITCHIn: Molecular Cell (2024) pp. 1556 - 1569.e10Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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The Endo-Lysosomal Damage ResponseIn: Annual Review of Biochemistry Vol. 93 (2024) Nr. 1, pp. 367 - 387Online Full Text: dx.doi.org/ (Open Access)
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VCF1 is a p97/VCP cofactor promoting recognition of ubiquitylated p97-UFD1-NPL4 substratesIn: Nature Communications Vol. 15 (2024) Nr. 1, 2459Online Full Text: dx.doi.org/ (Open Access)
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Structural basis of ubiquitin-independent PP1 complex disassembly by p97In: The EMBO Journal Vol. 42 (2023) Nr. 14, e113110Online Full Text: dx.doi.org/ (Open Access)
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Targeting of client proteins to the VCP/p97/Cdc48 unfolding machineIn: Frontiers in Molecular Biosciences Vol. 10 (2023) 1142989Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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The UBX domain in UBXD1 organizes ubiquitin binding at the C-terminus of the VCP/p97 AAA-ATPaseIn: Nature Communications Vol. 14 (2023) Nr. 1, 3258Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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MAGED2 Is Required under Hypoxia for cAMP Signaling by Inhibiting MDM2-Dependent Endocytosis of G-Alpha-SIn: Cells Vol. 11 (2022) Nr. 16, 2546Online Full Text: dx.doi.org/ (Open Access)
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Ubiquitin profiling of lysophagy identifies actin stabilizer CNN2 as a target of VCP/p97 and uncovers a link to HSPB1In: Molecular Cell Vol. 82 (2022) Nr. 14, pp. 2633 - 2649.e7Online Full Text: dx.doi.org/ (Open Access)
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Ubiquitin-directed AAA+ ATPase p97/VCP unfolds stable proteins crosslinked to DNA for proteolysis by SPRTNIn: The Journal of Biological Chemistry (JBC) Vol. 298 (2022) Nr. 6, 101976Online Full Text: dx.doi.org/ (Open Access)
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Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)In: Autophagy Vol. 17 (2021) Nr. 1, pp. 1 - 382Online Full Text: dx.doi.org/ (Open Access)
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Targeted substrate loop insertion by VCP/p97 during PP1 complex disassemblyIn: Nature Structural & Molecular Biology Vol. 28 (2021) Nr. 12, pp. 964 - 971Online Full Text: dx.doi.org/
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A pH-sensitive fluorescent protein sensor to follow the pathway of calcium phosphate nanoparticles into cellsIn: Acta Biomaterialia Vol. 111 (2020) pp. 406 - 417Online Full Text: dx.doi.org/
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Protein Phosphatase-1 Complex Disassembly by p97 is Initiated through Multivalent Recognition of Catalytic and Regulatory Subunits by the p97 SEP-domain AdaptersIn: Journal of Molecular Biology (JMB) Vol. 432 (2020) Nr. 23, pp. 6061 - 6074Online Full Text: dx.doi.org/
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Regulation of lysosome integrity and lysophagy by the ubiquitin-conjugating enzyme UBE2QL1In: Autophagy Vol. 16 (2020) Nr. 1, pp. 179 - 180Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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Repair or Lysophagy : Dealing with Damaged LysosomesIn: Journal of Molecular Biology (JMB) Vol. 432 (2020) Nr. 1, pp. 231 - 239Online Full Text: dx.doi.org/
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Zelkovamycin is an OXPHOS Inhibitory Member of the Argyrin Natural Product FamilyIn: Chemistry - A European Journal Vol. 26 (2020) Nr. 39, pp. 8524 - 8531Online Full Text: dx.doi.org/ (Open Access)
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Structure of the PUB Domain from Ubiquitin Regulatory X Domain Protein 1 (UBXD1) and Its Interaction with the p97 AAA+ ATPaseIn: Biomolecules Vol. 9 (2019) Nr. 12, 876Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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The ubiquitin-conjugating enzyme UBE2QL1 coordinates lysophagy in response to endolysosomal damageIn: EMBO Reports (2019) pp. e48014Online Full Text: dx.doi.org/ (Open Access)
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VCP maintains lysosomal homeostasis and TFEB activity in differentiated skeletal muscleIn: Autophagy Vol. 15 (2019) Nr. 6, pp. 1082 - 1099Online Full Text: dx.doi.org/ (Open Access)
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A Non-Competitive Inhibitor of VCP/p97 and VPS4 Reveals Conserved Allosteric Circuits in Type I and II AAA ATPasesIn: Angewandte Chemie International Edition Vol. 57 (2018) Nr. 6, pp. 1576 - 1580Online Full Text: dx.doi.org/
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AP-SWATH reveals direct involvement of VCP/ p97 in integrated stress response signaling through facilitating CReP/PPP1R15B degradationIn: Molecular and Cellular Proteomics (MCP) Vol. 17 (2018) Nr. 7, pp. 1295 - 1307Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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Ubiquitin-Independent Disassembly by a p97 AAA-ATPase Complex Drives PP1 Holoenzyme FormationIn: Molecular Cell Vol. 72 (2018) Nr. 4, pp. 766 - 777Online Full Text: dx.doi.org/ (Open Access)
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VCP/p97-Mediated Unfolding as a Principle in Protein Homeostasis and SignalingIn: Molecular Cell Vol. 69 (2018) Nr. 2, pp. 182 - 194Online Full Text: dx.doi.org/ (Open Access)
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Delivery of the autofluorescent protein R-phycoerythrin by calcium phosphate nanoparticles into four different eukaryotic cell lines (HeLa, HEK293T, MG-63, MC3T3) : Highly efficient, but leading to endolysosomal proteolysis in HeLa and MC3T3 cellsIn: PLoS ONE Vol. 12 (2017) Nr. 6, pp. e0178260Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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Detection and Clearance of Damaged Lysosomes by the Endo-Lysosomal Damage Response and LysophagyIn: Current Biology Vol. 27 (2017) Nr. 24, pp. R1330 - R1341Online Full Text: dx.doi.org/
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VCP/p97 cooperates with YOD1, UBXD1 and PLAA to drive clearance of ruptured lysosomes by autophagyIn: The EMBO Journal Vol. 36 (2017) Nr. 2, pp. 135 - 150Online Full Text: dx.doi.org/ (Open Access)
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Molecular tweezers target a protein-protein interface and thereby modulate complex formationIn: Chemical Communications: ChemComm Vol. 52 (2016) Nr. 98, pp. 14141 - 14144Online Full Text: dx.doi.org/ (Open Access)
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VCP/p97 Extracts Sterically Trapped Ku70/80 Rings from DNA in Double-Strand Break RepairIn: Molecular Cell Vol. 64 (2016) Nr. 1, pp. 189 - 198Online Full Text: dx.doi.org/ (Open Access)
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The N-terminal region of the ubiquitin regulatory X (UBX) domain-containing protein 1 (UBXD1) modulates interdomain communication within the valosin-containing protein p97In: The Journal of Biological Chemistry (JBC) Vol. 290 (2015) Nr. 49, pp. 29414 - 29427Online Full Text: dx.doi.org/ (Open Access)
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Inhibitor-3 ensures bipolar mitotic spindle attachment by limiting association of SDS22 with kinetochore-bound protein phosphatase-1In: The EMBO Journal Vol. 33 (2014) Nr. 22, pp. 2704 - 2720Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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The VCP/p97 system at a glance : connecting cellular function to disease pathogenesisIn: Journal of Cell Science Vol. 127 (2014) Nr. 18, pp. 3877 - 3883Online Full Text: dx.doi.org/
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The p97-Ufd1-Npl4 ATPase complex ensures robustness of the G2/M checkpoint by facilitating CDC25A degradationIn: The FEBS Journal Vol. 281 (2014) Nr. Suppl. 1, pp. 82Online Full Text: dx.doi.org/
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The p97-Ufd1-Npl4 ATPase complex ensures robustness of the G2/M checkpoint by facilitating CDC25A degradationIn: Cell Cycle Vol. 13 (2014) Nr. 6, pp. 919 - 927Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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Coal mining meets chromatin research: Digging for mechanisms in epigenetic control of gene expression : Report from the 43rd Annual Meeting of the German Genetics Society on "Chromatin and Epigenetics" in Essen, GermanyIn: BioEssays Vol. 35 (2013) Nr. 2, pp. 141 - 144Online Full Text: dx.doi.org/
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The UBXN-2/p37/p47 adaptors of CDC-48/p97 regulate mitosis by limiting the centrosomal recruitment of Aurora AIn: The Journal of Cell Biology (JCB) Vol. 201 (2013) Nr. 4, pp. 559 - 575Online Full Text: dx.doi.org/
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Ubiquitination of the n-terminal region of caveolin-1 regulates endosomal sorting by the VCP/p97 AAA-ATPaseIn: The Journal of Biological Chemistry (JBC) Vol. 288 (2013) Nr. 10, pp. 7363 - 7372Online Full Text: dx.doi.org/
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Distinct conformations of the protein complex p97-Ufd1-Npl4 revealed by electron cryomicroscopyIn: Proceedings of the National Academy of Sciences of the United States of America (PNAS) Vol. 109 (2012) pp. 1098 - 1103.Online Full Text: dx.doi.org/ (Open Access)
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Emerging functions of the VCP/p97 AAA-ATPase in the ubiquitin systemIn: Nature Cell Biology Vol. 14 (2012) Nr. 2, pp. 117 - 123Online Full Text: dx.doi.org/
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Expanding into new markets – VCP/p97 in endocytosis and autophagyIn: Journal of Structural Biology Vol. 179 (2012) Nr. 2, pp. 78 - 82Online Full Text: dx.doi.org/
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p97 complexes as signal integration hubsIn: BMC Biology (incorporating Journal of Biology) Vol. 10 (2012) pp. 48Online Full Text: dx.doi.org/ Online Full Text (Open Access)
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Cdc48/p97-Ufd1-Npl4 antagonizes Aurora B during chromosome segregation in HeLa cells.In: Journal of Cell Science Vol. 124 (2011) Nr. 9, pp. 1571 - 1580Online Full Text: dx.doi.org/
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Endolysosomal sorting of ubiquitylated caveolin-1 is regulated by VCP and UBXD1 and impaired by VCP disease mutationsIn: Nature Cell Biology Vol. 13 (2011) Nr. 9, pp. 1116 - 1123Online Full Text: dx.doi.org/
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The ubiquitin-selective segregase VCP/p97 orchestrates the response to DNA double-strand breaksIn: Nature Cell Biology Vol. 13 (2011) Nr. 11, pp. 1376 - 1382Online Full Text: dx.doi.org/
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A role for Cdc48/p97 and Aurora B in controlling chromatin condensation during exit from mitosisIn: Biochemistry and Cell Biology Vol. 88 (2010) Nr. 1, pp. 23 - 28Online Full Text: dx.doi.org/
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Caveolin-1 is ubiquitinated and targeted to intralumenal vesicles in endolysosomes for degradationIn: The Journal of Cell Biology (JCB) Vol. 191 (2010) Nr. 3, pp. 615 - 629Online Full Text: dx.doi.org/
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Role(s) of Cdc48/p97 in mitosisIn: Biochemical Society Transactions Vol. 36 (2008) Nr. 1, pp. 126 - 130
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Cdc48/p97 promotes reformation of the nucleus by extracting the kinase Aurora B from chromatinIn: Nature Vol. 450 (2007) Nr. 7173, pp. 1258
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Detailed structural insights into the p97-Npl4-Ufd1 interfaceIn: The Journal of Biological Chemistry (JBC) Vol. 282 (2007) Nr. 29, pp. 21361 - 21369
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NSF- and SNARE-mediated membrane fusion is required for nuclear envelope formation and completion of nuclear pore complex assembly in Xenopus laevis egg extractsIn: Journal of Cell Science Vol. 120 (2007) Nr. 16, pp. 2895 - 2903
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Structural insights into the p97-Ufd1-NpI4 complexIn: Proceedings of the National Academy of Sciences of the United States of America (PNAS) Vol. 104 (2007) Nr. 2, pp. 467 - 472
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Golgi reassembly after mitosis : The AAA family meets the ubiquitin familyIn: Biochimica et Biophysica Acta (BBA) - Molecular Cell Research Vol. 1744 (2005) Nr. 2, pp. 108 - 119Online Full Text: dx.doi.org/ (Open Access)
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The AAA ATPase p97/VCP interacts with its alternative co-factors, Ufd1-Npl4 and p47, through a common bipartite binding mechanismIn: The Journal of Biological Chemistry (JBC) Vol. 279 (2004) Nr. 48, pp. 49609 - 49616
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Ubiquitin Interactions of NZF Zinc FingersIn: The EMBO Journal Vol. 23 (2004) Nr. 7, pp. 1411 - 1421
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VCIP135 acts as a deubiquitinating enzyme during p97–p47-mediated reassembly of mitotic Golgi fragmentsIn: The Journal of Cell Biology (JCB) Vol. 164 (2004) Nr. 7, pp. 973 - 978
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Function of the p97–Ufd1–Npl4 complex in retrotranslocation from the ER to the cytosol : dual recognition of nonubiquitinated polypeptide segments and polyubiquitin chainsIn: The Journal of Cell Biology (JCB) Vol. 162 (2003) Nr. 1, pp. 71 - 84Online Full Text: dx.doi.org/
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Structure and Ubiquitin Interactions of the Conserved Zinc Finger Domain of Npl4In: The Journal of Biological Chemistry (JBC) Vol. 278 (2003) pp. 20225 - 20234
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The AAA-ATPase Cdc48/p97 regulates spindle disassembly at the end of mitosisIn: Cell Vol. 115 (2003) Nr. 3, pp. 355 - 367
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Direct binding of ubiquitin conjugates by the mammalian p97 adaptor complexes, p47 and Ufd1–Npl4In: The EMBO Journal Vol. 21 (2002) Nr. 21, pp. 5645 - 5652.
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Distinct AAA-ATPase p97 complexes function in discrete steps of nuclear assemblyIn: Nature Cell Biology Vol. 3 (2001) Nr. 12, pp. 1086 - 1091
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The AAA ATPase Cdc48/p97 and its partners transport proteins from the ER into the cytosolIn: Nature Vol. 414 (2001) pp. 652 - 656
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A complex of mammalian Ufd1 and Npl4 links the AAA-ATPase, p97, to ubiquitin and nuclear transport pathwaysIn: The EMBO Journal Vol. 19 (2000) Nr. 10, pp. 2181 - 2192
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Structure of the AAA ATPase p97In: Molecular Cell Vol. 6 (2000) Nr. 6, pp. 1473 - 1484Online Full Text: dx.doi.org/
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The mouse p97 (CDC48) gene. Genomic structure, definition of transcriptional regulatory sequences, gene expression, and characterization of a pseudogene.In: The Journal of Biological Chemistry (JBC) Vol. 274 (1999) Nr. 15, pp. 10154 - 10162
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The p47 co-factor regulates the ATPase activity of the membrane fusion protein, p97In: FEBS Letters Vol. 437 (1998) Nr. 3, pp. 255 - 257